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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV19863953 hCoV-19/deer/USA/IL-22-006202-028/2021 EPI_ISL_16384475 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-21 Odocoileus virginianus 29745 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29735 99.97
OEAV19863957 hCoV-19/deer/USA/KS-22-007926-004/2021 EPI_ISL_16388460 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-13 Odocoileus virginianus 29790 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29789 100.00
OEAV19863992 hCoV-19/deer/USA/MA-22-006202-072/2021 EPI_ISL_16384485 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-29 Odocoileus virginianus 29819 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28028 93.99
OEAV19864021 hCoV-19/deer/USA/NC-22-006202-021/2021 EPI_ISL_16384473 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-20 Odocoileus virginianus 29786 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28754 96.54
OEAV19864023 hCoV-19/deer/USA/NC-22-006202-041/2021 EPI_ISL_16384479 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-20 Odocoileus virginianus 29753 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 27396 92.08
OEAV19864041 hCoV-19/deer/USA/NJ-22-006202-066/2021 EPI_ISL_16384484 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-09 Odocoileus virginianus 29812 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 27772 93.16
OEAV19864042 hCoV-19/deer/USA/NJ-22-006202-076/2021 EPI_ISL_16384486 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-12-07 Odocoileus virginianus 29795 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29467 98.90
OEAV19864051 hCoV-19/deer/USA/NJ-22-007926-032/2022 EPI_ISL_16388469 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-20 Odocoileus virginianus 29787 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29781 99.98
OEAV19864092 hCoV-19/deer/USA/NY-22-006202-002/2021 EPI_ISL_16384469 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-30 Odocoileus virginianus 29775 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29772 99.99
OEAV19864098 hCoV-19/deer/USA/NY-22-006202-035/2021 EPI_ISL_16384476 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-21 Odocoileus virginianus 29761 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29509 99.15
OEAV19864099 hCoV-19/deer/USA/NY-22-006202-036/2021 EPI_ISL_16384477 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-29 Odocoileus virginianus 29392 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 28449 96.79
OEAV19864100 hCoV-19/deer/USA/NY-22-006202-040/2021 EPI_ISL_16384478 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-30 Odocoileus virginianus 29833 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29490 98.85
OEAV19864104 hCoV-19/deer/USA/NY-22-006202-051/2021 EPI_ISL_16384481 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-11-29 Odocoileus virginianus 29740 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29740 100.00
OEAV19864141 hCoV-19/deer/USA/WV-22-007926-003/2022 EPI_ISL_16388459 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-25 Odocoileus virginianus 29864 2023-01-04 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29864 100.00
OEAV20547041 hCoV-19/deer/USA/MO-22-013500-012/2022 EPI_ISL_16429144 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-16 Odocoileus virginianus 29718 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29269 98.49
OEAV20547057 hCoV-19/deer/USA/NY-22-013500-013/2022 EPI_ISL_16429145 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-03-16 Odocoileus virginianus 29795 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29769 99.91
OEAV20547058 hCoV-19/deer/USA/OK-22-013500-005/2022 EPI_ISL_16429138 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-21 Odocoileus virginianus 29817 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29815 99.99
OEAV20547059 hCoV-19/deer/USA/OK-22-013500-007/2022 EPI_ISL_16429139 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-02-14 Odocoileus virginianus 29827 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29827 100.00
OEAV20547063 hCoV-19/deer/USA/SD-22-013500-003/2022 EPI_ISL_16429136 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-01-14 Odocoileus virginianus 29830 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29826 99.99
OEAV20547074 hCoV-19/deer/USA/WV-22-013500-011/2022 EPI_ISL_16429143 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2022-03-15 Odocoileus virginianus 29789 2023-01-06 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID USDA-NWRC Wildlife Services Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA 29788 100.00
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